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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906215.1_cds_XP_016456431.1_50268
CDS Infomation

[gene=LOC107780408] [db_xref=GeneID:107780408] [protein=RHOMBOID-like protein 10, chloroplastic isoform X2] [protein_id=XP_016456431.1] [location=join(46481..46589,47011..47320,47569..47623,47716..47796,47876..47972,48066..48133,48594..48692,49013..49054,49747..49893)] [gbkey=CDS]
Sequence

ATGGGGTCCCACAACCAGCCACCTCATCACCAACGCCGCCGCTCTCCGCCTCGGAGACTT
CCTCCACCGCCGTATCCGCCTCACTTATCTTCTTCAAACTTCTATCAAGTCGCAAGGAAT
TCTCGAAATGCAAAGATCTTAACCACCACTTTGGTTGCTGTACAGCATATTTATTGTCAT
GGTCATGGGCCTAAATTGAAGGATGTTTGGCATAAATGGACCGTTCATGTTACTGGATTC
AATATCCTTCAATGGTCACAGGATGTCTTATCTGGCGCACACACGAACTTATTATTCTTC
AATGCTGATGAAAGTAGAAGGGAATTCAAACAATTTCAGAAGTCATCCTCAAAGTCGTCT
AGATCATTCTTTTCTAGTGAAAGAAAATGGACCAACATATTCCTTGCTCTTAACATATTG
GTCTATATTGCACAAGTTGCAACTGATGGAAAGCTTTTATTTTGGGGAGCCAAGATTAAC
AGTCTTATTAACAAAGGGCAATTATGGAGGCTGATTACTTCTTCATTCTTGCATGCAAAT
ATAGGCCATCTCTTGGTTAATTGTTATTCGTTGAATTCTGTTGGACCTGGTGTTGAAAAA
ATCAGTGGCCCTAGAAGATATGTTGTGTTGTATTTGACATCTGCAATTGCAAGTTCAGCC
ATGAGTTACTGGCTTAGCAAGGCACCTGCAGTTGGTGCCTCAGGGGCAATTTTGGGATTA
GTTGGATCTTTTGCAGTGTTTGTTTTGAGGCATAGAGGCATGGTAAAAGGCACTGAGGGG
GATCTTCGATATATAGCAAATGTGATTGTTTTAAATATGGCTATTGGACTACTGAACAAA
GGGATCGACAACTGGGGACATCTTGGAGGCTTAATAGGAGGAGGAGCAGTGTCATGGCTT
CTTGGCCCAGCGTGGAAGATTCAATCCATCTCCAGTGAAGGCCGACGAGTTTTTGCTGAC
ACGGCACCAATTTTCTCTATTATTCAAACTAAAAGGGACAAGTCATAA

Peptide Sequence

PEP ID

XP_016456431.1
PEP Infomation

PREDICTED: RHOMBOID-like protein 10, chloroplastic isoform X2 [Nicotiana tabacum]
Sequence

MGSHNQPPHHQRRRSPPRRLPPPPYPPHLSSSNFYQVARNSRNAKILTTTLVAVQHIYCH
GHGPKLKDVWHKWTVHVTGFNILQWSQDVLSGAHTNLLFFNADESRREFKQFQKSSSKSS
RSFFSSERKWTNIFLALNILVYIAQVATDGKLLFWGAKINSLINKGQLWRLITSSFLHAN
IGHLLVNCYSLNSVGPGVEKISGPRRYVVLYLTSAIASSAMSYWLSKAPAVGASGAILGL
VGSFAVFVLRHRGMVKGTEGDLRYIANVIVLNMAIGLLNKGIDNWGHLGGLIGGGAVSWL
LGPAWKIQSISSEGRRVFADTAPIFSIIQTKRDKS

Transcript Sequence

Gene sequence data has not been registered.